Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889899.1_cds_XP_016444595.1_39640
CDS Infomation

[gene=LOC107769852] [db_xref=GeneID:107769852] [protein=cleavage and polyadenylation specificity factor subunit 3-II-like isoform X2] [protein_id=XP_016444595.1] [location=complement(join(22537..23334,23675..23774,24533..24674,24863..24967,31797..31866,32598..32663,33417..33480,34111..34247,35088..35255))] [gbkey=CDS]
Sequence

ATGCTGAGTAAAAATTTCAGTCCAGTTTCCCTCTCTCTCACACTCGTGTTAGTGCTAGTA
GCTAACCCATGCGGCAGCTGTGCGAAGATCACTATAGTTTCTGTCTTCATTCTTCACCTT
GGAAGCCACAAGCAGCTATATATACTCCATTTCCATATGGGAAGCTGTGTTCTTGGTGCT
GCAATGTTTTATGCTAAAGTGGGTGATGCTGCTATAGTATACACTGGAGATTATAATATG
ACACCCGATAGACATCTTGGAGCTGCTCAAATCGATCGGCTGCAGCTGGACCTTGTCATA
ACAGAGTCAACTTATGCAACCACCTTCCGTGATTCCAAATATGCCCGGGAGCGGGAGTTT
CTCGAAGCAGTTCACAAATGTGTTGCTAGTGGAGGAAAGGTGCTCATCCCTACATTTGCT
CTGGGAAGAGCTCAGGAACTCTGTATGCTATTGGATGACTATTGGGAGCGAATGAATCTT
AAAGCTCCTATTTATTTTGCCGCAGGTTTGACTATTCAAGCTAATTTGTACTACAAAGTT
CTCATAAACTGGACCAGCCAAAAGGTGAAAAGTACTGCCGCAACACGAAATGCATTTGAC
TTCAAAAATGTCCACAGTTTCGATCGTTCCATGATAAATGCTCCTGGACCTTGTGTTTTA
TTTGCTACTCCGGGCATGATAAGTGGGGGATTTTCACTTGAAGTTTTCAAGCAATGGGCT
CCGTGCGGACAGAACCTCATAACACTCCCAGGATATTGCGTAGCTGGGACAGTAGGACAC
AGGTTGATGTCTGCTAAAACTCCCGCCAAAATAAATGTTGATGAAAATACCCAGATTGAT
GTGCGCTGCCAGATCCATCAGCTGTCTTTTAGTCCACATACTGATGCCAAGGGAATCATG
GATTTGGTCAAATTTCTATCACCCAAACATGTAATACTTGTGCATGGCGAAAAGCCCAAG
ATGGCATTGCTAAAAAAGGGAATTGAATCAGACTTGGGGATCCCGTGCTATTATCCTGCA
AATAACGAGACTGTGTGCATTCCCTCAACTCTCTATGTTAAAGCTGATGCATCCAGAGAA
TTTCTTAAAAGTTCTTTGAGCCCAAATTTCAAGTTTCTAAACACAAGTTCAAGAGCAGAC
ATTGATTTGATTCTGAATGCGAGAACCGAGTCTTTTGTGCAAGTATGTGATGACAGAGTA
GCTGAAGGGGTGCTAACCATGCAGAAAAACCAGCATCCCAAAATTGTGCACCAGAATGAG
CTAATGGTCATGGTAGGAGGAGAAAATCATGAAGTTCAGTTTGCTTACTGTTGTCCAGTG
CGTGTCTCTGATGACTGTAAAGATGTAGCTCTGTCACCAGGAGAAAACACGCCTCCTGTG
CTTGATAAATGCCCGTGGCTGCACTTACTATACACAAAACTCTCAAATGATTTTCAAGAT
GTAACCTATCAGAATGATGGAGACCGTCTCCAGATAGAGTCAGTTACTGTTTCTTTGTGT
CTGAAGGAGAAGTGTCCTCATAGAATACATGTTAGTCCTGATAGCACATCTGAAACAGTA
AACTTCTGTTGCGTGTGGTCAATGGTAGATGAGAAACTTGCTTGGAGGGTCATTTCAATC
ATGAAGAATTTGGAGTTGAAGACTCGTTAA

Peptide Sequence

PEP ID

XP_016444595.1
PEP Infomation

PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II-like isoform X2 [Nicotiana tabacum]
Sequence

MLSKNFSPVSLSLTLVLVLVANPCGSCAKITIVSVFILHLGSHKQLYILHFHMGSCVLGA
AMFYAKVGDAAIVYTGDYNMTPDRHLGAAQIDRLQLDLVITESTYATTFRDSKYAREREF
LEAVHKCVASGGKVLIPTFALGRAQELCMLLDDYWERMNLKAPIYFAAGLTIQANLYYKV
LINWTSQKVKSTAATRNAFDFKNVHSFDRSMINAPGPCVLFATPGMISGGFSLEVFKQWA
PCGQNLITLPGYCVAGTVGHRLMSAKTPAKINVDENTQIDVRCQIHQLSFSPHTDAKGIM
DLVKFLSPKHVILVHGEKPKMALLKKGIESDLGIPCYYPANNETVCIPSTLYVKADASRE
FLKSSLSPNFKFLNTSSRADIDLILNARTESFVQVCDDRVAEGVLTMQKNQHPKIVHQNE
LMVMVGGENHEVQFAYCCPVRVSDDCKDVALSPGENTPPVLDKCPWLHLLYTKLSNDFQD
VTYQNDGDRLQIESVTVSLCLKEKCPHRIHVSPDSTSETVNFCCVWSMVDEKLAWRVISI
MKNLELKTR

Transcript Sequence

Gene sequence data has not been registered.